BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F06LP1|AL426070
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1259 1551 0.0
>3x_Contig1259
Length = 4915
Score = 1551 bits (781), Expect = 0.0
Identities = 792/795 (99%), Gaps = 1/795 (0%)
Strand = Plus / Plus
Query: 38 agcaagcggaaaggttttgtgaagttggctttgcaaactgggaatgtgagtcttgtacct 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agcaagcggaaaggttttgtgaagttggctttgcaaactgggaatgtgagtcttgtacct 61
Query: 98 gtgtatggatttggtgaaactgatacttacaagattctgaagcttaaaaatgactctata 157
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtgtatggatttggtgaa-ctgatacttacaagattctgaagcttaaaaatgactctata 120
Query: 158 ataggcaggatacagatatggcttaaagagaactacagcttcactgtccctctatttttc 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataggcaggatacagatatggcttaaagagaactacagcttcactgtccctctatttttc 180
Query: 218 gctcgtggtgtattcaattatgattttggtttactaccgtttagacatccagtcaatgtt 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctcgtggtgtattcaattatgattttggtttactaccgtttagacatccagtcaatgtt 240
Query: 278 gttgttggaaaccctattcatattaaagaaaagatagatcatccaacaattgaggagatt 337
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgttggaaaccctattcatattacagaaaagatagatcatccaacaattgaggagatt 300
Query: 338 gatcattaccattccttatacattgaagaattgaaacgtctttacgatgataacaaggca 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatcattaccattccttatacattgaagaattgaaacgtctttacgatgataacaaggca 360
Query: 398 aaatttaactattcagaaaaaactttaaatatagtggaatgaaactctttaccaaaaaac 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatttaactattcagaaaaaactttaaatatagtggaatgaaactctttaccaaaaaac 420
Query: 458 taaataaaatatgatactgcctcgacggtgaggcagcattcagtattgtctctatatatc 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taaataaaatatgatactgcctcgacggtgaggcagcattcagtattgtctctatatatc 480
Query: 518 tgcattaccaccagacactacaattaamagtaaaataatccaaaccttgctaaaacgaaa 577
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 tgcattaccaccagacactacaattaaaagtaaaataatccaaaccttgctaaaacgaaa 540
Query: 578 aaacctccgcttttgtgagttgtactcagtctcaccgtttccttactctgtcactaacaa 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaacctccgcttttgtgagttgtactcagtctcaccgtttccttactctgtcactaacaa 600
Query: 638 attctcacgtaactcatcaacagtgacatccttctttagtcgatcaatatatatcctttc 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attctcacgtaactcatcaacagtgacatccttctttagtcgatcaatatatatcctttc 660
Query: 698 ccacttatttatattccgtgcaggttgtttacctaccgtaacaaatcgtttcgggactat 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccacttatttatattccgtgcaggttgtttacctaccgtaacaaatcgtttcgggactat 720
Query: 758 aagaaaccgaacatattttagaacctttttagtaagaaaaagattaaaggatggctctta 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aagaaaccgaacatattttagaacctttttagtaagaaaaagattaaaggatggctctta 780
Query: 818 gcatcacagaagtag 832
|||||||||||||||
Sbjct: 781 gcatcacagaagtag 795
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7143
Number of Sequences: 1807
Number of extensions: 7143
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)